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  • Hongwei Xun, Lijie Lian, Jing Yuan, Jianhui Hong, Shanmeng Hao, Haonan Zhao, Shuhan Liu, Wanjie Feng, Huanran Yin, Bao Liu, and Xutong Wang. Domains rearranged methyltransferases (DRMs)-mediated DNA methylation plays key roles in modulating gene expression and maintaining transposable element silencing in soybean. Journal of Integrative Plant Biology. March 07, 2025.https://onlinelibrary.wiley.com/doi/abs/10.1111/jipb.13883/
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  • Xutong Wang, Jingbo Duan, Chancelor B Clark, Wanjie Feng, Jianxin Ma. Noncanonical transcription initiation is primarily tissue specific and epigenetically tuned in paleopolyploid plants. The Plant Cell, koae288, 14 November 2024 https://doi.org/10.1093/plcell/koae288/
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  • Hongwei Xun, Yadi Wang, Jing Yuan, Lijie Lian, Wanjie Feng, Shuhan Liu, Jianhui Hong, Bao Liu, Jianxin Ma, and Xutong Wang. Non-CG DNA hypomethylation promotes photosynthesis and nitrogen fixation in soybean. PNAS. July 20, 2024.https://pubmed.ncbi.nlm.nih.gov/39213181/
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  • Wang W, Duan J, Wang X, Feng X, Chen L, Clark CB, Swarm SA, Wang J, Lin S, Nelson RL, Meyers BC, Feng X, Ma J. Long noncoding RNAs underlie multiple domestication traits and leafhopper resistance in soybean. Nat Genet. 2024 Apr 29. doi: 10.1038/s41588-024-01738-2. Epub ahead of print. PMID: 38684899.http://dx.doi.org/10.1038/s41588-024-01738-2
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  • Wang, Xutong et al. “Widespread transcription initiation within coding sequences marks tissue identity and accessible chromatin.” bioRxiv (2024): n. pag.http://dx.doi.org/10.1101/2024.03.27.587116
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  • Li S, Li Y, Zhu H, Chen L, Zhang H, Lian L, Xu M, Feng X, Hou R, Yao X, Lin Y, Wang H, Wang X. Deciphering PDH1's role in mung bean domestication: a genomic perspective on pod dehiscence. Plant J. 2024 Jun;118(5):1413-1422. DOI:10.1111/tpj.16680
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  • Wanjie Feng, Pengfei Gao, Xutong Wang. AI Breeder: Genomic Predictions for Crop Breeding, New Crops (2023)., https://doi.org/10.1016/j.ncrops.2023.12.005
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  • Pengfei Gao, Haonan Zhao, Zheng Luo, Yifan Lin, Wanjie Feng, Yaling Li, Fanjiang Kong, Xia Li, Chao Fang, Xutong Wang. SoyDNGP: A Web-Accessible Deep Learning Framework for Genomic Prediction in Soybean Breeding,Briefings in Bioinformatics, Volume 24, Issue 6, November 2023, bbad349, https://doi.org/10.1093/bib/bbad349
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  • Ting Zhao, Hongyu Wu, Xutong Wang, ..., Xueying Guan. Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield[J]. Cell Reports, 2023, 42(9).https://doi.org/10.1016/j.celrep.2023.113111
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  • Shuai Li, Xutong Wang (co-first), Wenying Xu, Tong Liu, Chunmei Cai, Liyang Chen, Chancelor B. Clark, Jianxin Ma: Unidirectional Movement of Small RNAs from Shoots to Roots in Interspecific Heterografts. Nature Plants 7,50-59 (2021). https://doi.org/10.1038/s41477-020-00829-2
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  • Bo ren,Xutong Wang (co-first) , Jingbo Duan, Jianxin Ma: Rhizobial tRNA-Derived Small RNAs Are Signal Molecules Regulating Plant Nodulation. Science 10.1126/science.aav8907 (2019) for the online version. https://www.science.org/doi/10.1126/science.aav8907
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  • Xutong Wang, Liyang Chen, Jianxin Ma: Genomic introgression through interspecific hybridization counteracts genetic bottleneck during soybean domestication. Genome Biology 01/2019; 20(22)., DOI:10.1186/s13059-019-1631-5 https://doi.org/10.1186/s13059-019-1631-5
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  • Xutong Wang, Lanjuan Hu, Xiaofei Wang, Ning Li, Chunming Xu, Lei Gong, Bao Liu: DNA Methylation Affects Gene Alternative Splicing in Plants: An Example from Rice. Molecular Plant 10/2015; 9(2)., DOI:10.1016/j.molp.2015.09.016 https://doi.org/10.1016/j.molp.2015.09.016
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  • Dajian Zhang,Xutong Wang (co-first) , Shuo Li, Chaofan Wang, Michael J. Gosney, Michael V. Mickelbart, Jianxin Ma: A Post-domestication Mutation Dt2 Triggers Systemic Modification of Divergent and Convergent Pathways Modulating Multiple Agronomic Traits in Soybean. Molecular Plant 05/2019;, DOI:10.1016/j.molp.2019.05.010 https://doi.org/10.1016/j.molp.2015.09.016
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  • Xutong Wang, Huakun Zhang, Yaling Li, Zhibin Zhang, Linfeng Li, Bao Liu: Transcriptome asymmetry in synthetic and natural allotetraploid wheats, revealed by RNA-sequencing. New Phytologist 10/2015; 209(3)., DOI:10.1111/nph.13678 https://doi.org/10.1111/nph.13678
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  • Xutong Wang, Zhibin Zhang, Tiansi Fu, Lanjuan Hu, Chunming Xu, Lei Gong, Jonathan F. Wendel, Bao Liu: Gene-body CG methylation and divergent expression of duplicate genes in rice. Scientific Reports 06/2017; 7(1)., DOI:10.1038/s41598-017-02860-4
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